[caret-users] Visualizing functional data normalized to SUIT

[J D Bijsterbosch]

Dear CARET users,

I would like to visualize functional MRI group results to a flattened
cerebellar
atlas. I have normalized my images using the SUIT cerebellar template and would
like to visualize this using CARET. The SUIT package provides a spec file and I
have attempted to visualize my results using 'map volume(s) to surface(s)' in
CARET. However, my results are not the same as they are in SPM5. 

I am unclear about the steps to be taken and the meaning of for example the
thresholding and color-coding in the final image. The tutorials and quick
guides are not very helpful as they only tell you what to click for the
standard case with provided data and do not explain the meaning of each step.

I hope someone can help clarify the steps in CARET so that I can visualize my
results successfully.


Best wishes,


Janine Bijsterbosch


Academic Clinical Psychiatry
University of Sheffield
United Kingdom

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