[caret-users] Mapping Paint areas from Surface to MRI

[Donna Dierker]

Hi Hamied,

Sure: Attributes: Paint: Convert paint column to paint volume. Select 
the LVE00 column. For Volume Selection, set Parameters using a volume 
file and select Macaque.F99UA1.LR.03-11+orig.HEAD.

You'll need to save the resulting Volume paint file, and as I recall, 
not all file formats work for this purpose. I believe both WUNIL ifh 
format does, as well as AFNI (although our tags for the paint indices 
are not part of the standard AFNI header, I don't believe). I don't 
think NIFTI works, but John Harwell will correct me if I'm wrong.

Donna

On 01/07/2008 10:58 AM, Hamied Haroon wrote:
>
> Dear Donna and David,
>
> There are about 12 different cortical parcellation paint files 
> available in Caret for Macaque F99UA1 (right hemisphere). However, 
> only LVE00 is mapped onto the anatomical MRI volume 
> (Macaque.F99UA1.LR.03-11+orig.HEAD) as well as the surfaces. Is there 
> anyway, in Caret, to map one of the other cortical parcellation paint 
> files onto F99UA1’s anatomical MRI volume, in the same way as was done 
> for LVE00? I would be grateful if you could please let me know.
>
> I look forward to hearing from you.
>
> Many thanks in anticipation.
>
> Hamied
>
> ________________________________________________
>
> Hamied Ahmad Haroon PhD AMInstP
>
> Research Associate in MR Neuroimaging
>
> Imaging Science and Biomedical Engineering Research Group
>
> School of Medicine
>
> Faculty of Medical and Human Sciences
>
> The University of Manchester
>
> Room G.603 Stopford Building, Oxford Road,
>
> Manchester M13 9PT
>
> England, United Kingdom
>
> Tel: +44 (0)161 275 6871 Fax: +44 (0)161 275 5145
>
> Email: hamied.haroon at manchester.ac.uk 
> <mailto:hamied.haroon at manchester.ac.uk>
>
> Web: www.isbe.man.ac.uk/~hharoon <http://www.isbe.man.ac.uk/%7Ehharoon>
>
> ________________________________________________
>
> ------------------------------------------------------------------------
>
> _______________________________________________
> caret-users mailing list
> caret-users at brainvis.wustl.edu
> http://pulvinar.wustl.edu/mailman/listinfo/caret-users
>