[caret-users] listing clusters

donovan at psych.ucsb.edu donovan at psych.ucsb.edu
Thu Jan 10 18:27:40 CST 2008


Hi,
I have a question on how to get a list of clusters from a thresholded  
metric file. I am displaying SPM2 t images (fMRI) onto the  
human.colin.Cerebral atlas in Caret v5.3. I am able to threshold the  
image but I can't seem to figure out how to get a list of maxima and  
their coordinates. I found in your archives a suggestion to copy the  
metric file to a surface_shape but I am unfamiliar with the command  
line prompts you suggested (I have only used the menus).  Any help you  
can give me with doing this through the menus would be greatly  
appreciated.

Thanks in advance!

Christa-Lynn Donovan
PhD Candidate
Department of Psychology
University of California
Santa Barbara, 93106





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