[caret-users] caret_command -metric-clustering

Donna Dierker donna at brainvis.wustl.edu
Tue May 20 11:14:39 CDT 2008


Hi Akiko,

You're right:  caret_distribution.v5.51.Linux.zip has an older version 
of caret_command that  doesn't support that feature.  Instead, it has 
caret_metric, which gives the attached output when called with the 
-help-cs flag.

To me, it seems like eons ago when John folded those satellite command 
line utilities (caret_map_fmri, caret_metric, and caret_file_convert) 
into caret_command.

The snapshots provide updated executables for the GUI Caret, but 
caret_command snapshots are a bit trickier to find.  I see some in John 
Harwell's ftp directory 
(http://brainvis.wustl.edu/pub/john/simon/caret_command_exe_linux.zip 
login pub ; password download), but they are all older than my 
caret_command, which is not even 30 minutes old.

What platform are you using?

Donna

On 05/20/2008 10:40 AM, Akiko Ikkai wrote:
> Hi Donna,
>
> I'm looking for methods to smooth metric files from the command line. I'm assuming I should use "caret_command -metric-clustering" since within Caret window, smoothing is under Attributes > Metric > Clustering and Smoothing.  I can't get help information on this command "caret_command -metric-clustering" (ERROR: Unrecognized operation: -metric-clustering). I can get help info on other commands no problem, like "caret_command -metric-or-shape-stat-one-sample-t-test". I think we have the latest version of Caret (v5.51). So, my questions are..
>
> 1. is "caret_command -metric-clustering" the right command? If not, please let me know which one I should use, and what inputs are needed.
> 2. Is info for "caret_command -metric-clustering" accessible from command line? 
>
> Thanks in advance!
> Akiko
> _______________________________________________
> caret-users mailing list
> caret-users at brainvis.wustl.edu
> http://brainvis.wustl.edu/mailman/listinfo/caret-users
>   

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