[caret-users] Problem color assignment

[Alireza Salamy]

Hello again,
 
How it would be possible to assign different colors to primary and secondary overlap for the matrix type?for example assign red to the Primary overlap and blue to the secondary overlap?
In addition,how one can demonstrate the exact brodman area of the mapped activation
?I know that one can click on the activation and then check the paint on the pop-ed-up identify window,but is that a way to show the brodman area on the image beside the activation?
 
Thanks a lot
/Alireza
--- On Fri, 9/26/08, Donna Dierker <donna.dierker at sbcglobal.net> wrote:

From: Donna Dierker <donna.dierker at sbcglobal.net>
Subject: Re: [caret-users] Problem with caret 5.1
To: alireza_sal2000 at yahoo.com
Cc: caret-users at brainvis.wustl.edu
Date: Friday, September 26, 2008, 7:27 PM






Not as far as I know, but I haven't tried.  If John made that enhancement, it would be in the change log (see caret page).


----- Original Message ----
From: Alireza Salamy <alireza_sal2000 at yahoo.com>
To: Donna Dierker <donna.dierker at sbcglobal.net>
Cc: caret-users at brainvis.wustl.edu
Sent: Friday, September 26, 2008 8:21:43 AM
Subject: Re: [caret-users] Problem with caret 5.1






Hello,
 
what about the latest version of caret(5.6)?can it be feeded by Spm5.Img/hdr pair?

--- On Fri, 9/26/08, Donna Dierker <donna.dierker at sbcglobal.net> wrote:

From: Donna Dierker <donna.dierker at sbcglobal.net>
Subject: Re: [caret-users] Problem with caret 5.1
To: alireza_sal2000 at yahoo.com
Date: Friday, September 26, 2008, 3:57 PM






Hi Alireza,
 
If you are feeding Caret a SPM5 .img/.hdr pair, rather than a .nii volume, this could happen.  Caret does not yet read NIfTI .img/.hdr pairs properly; however, if you write the volume as .nii, you'll have better luck.
 
Donna


----- Original Message ----
From: Alireza Salamy <alireza_sal2000 at yahoo.com>
To: caret-users at brainvis.wustl.edu
Sent: Friday, September 26, 2008 3:51:40 AM
Subject: [caret-users] Problem with caret 5.1






Hello,
 
I am a new user,so sorry if this question sounds stupid.
I have a problem with caret 5.1.It does not actually show  my activation of any of the hemisphere.First I chose the spec file and then I choose map functional volume to matrix and then choose the selected metric by primary overlap option but nothing appears on my brain.I use SPM5 to make the image file.Could it be the reason of coordinate of SPM5(isn't it supported by this version of caret5.1)?shall I use the latest version?
Thanks in advance
/A




      
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