[caret-users] Error in number of nodes

Donna Dierker donna at brainvis.wustl.edu
Thu Dec 3 10:09:44 CST 2009


Wait just a minute:  Something like this just happened to me, but was 
easy to fix.

I opened a spec file that had scenes, but didn't select a scene yet.  
Then I loaded a metric file.  It complained about the number of nodes, 
although I knew all had 73730 nodes.  I selected a scene and tried 
opening the metric.  It worked.

If you don't have anything loaded yet (coord/topo), opening something 
like a shape file may not work.  Select a scene first.

On 12/02/2009 08:41 AM, Donna Dierker wrote:
> Hi Alon,
>
> I searched for that spec file in sumsdb 
> (http://sumsdb.wustl.edu/sums/directory.do?id=6687503); downloaded it; 
> and opened the spec with no problem.  Here is what the byte counts 
> were for those files:
>
> it.wustl.edu 318% ls -l Human.sphere_6.RIGHT_HEM.73730.topo 
> Human_Buck_Case02.R.F.RegToPALS_B12.LR.FIDUCIAL_711-2C.align.73730.coord 
> Human.PALS_B12.LR.BUCK1-12_RIGHT-DEPTHnr_INDIVIDUAL_Avg_StdDev.73730.surface_shape 
>
> -rw-r--r--  1 donna users  885294 Dec  2 08:12 
> Human_Buck_Case02.R.F.RegToPALS_B12.LR.FIDUCIAL_711-2C.align.73730.coord
> -rw-r--r--  1 donna users 4134251 Dec  2 08:11 
> Human.PALS_B12.LR.BUCK1-12_RIGHT-DEPTHnr_INDIVIDUAL_Avg_StdDev.73730.surface_shape 
>
> -rw-r--r--  1 donna users 1769663 Dec  2 08:12 
> Human.sphere_6.RIGHT_HEM.73730.topo
>
> See what they are on your end.  I suspect your *data* files got 
> corrupted.  Your executables are probably fine.
>
> Donna
>
> On 12/02/2009 04:52 AM, Alon Keren wrote:
>> Hello,
>>  
>> Recently I have upgraded to caret 5.612 (the previous version I used 
>> was from 2007). I am trying to open an old spec file, but I receive 
>> an error message stating that there the coord file contains no nodes, 
>> and that the surface shape contains different number of nodes than 
>> another file (the message is cut). The error message is attached.
>> The files I'm using are taken from the SumsDB:
>> PALS_B12.RIGHT.REFERENCE-Surfaces_Volumes.73730.spec
>> Human.sphere_6.RIGHT_HEM.73730.topo
>> Human_Buck_Case02.R.F.RegToPALS_B12.LR.FIDUCIAL_711-2C.align.73730Human.PALS_B12.LR.BUCK1-12_RIGHT-DEPTHnr_INDIVIDUAL_Avg_StdDev.73730.surface_shape 
>>
>>  
>> I've tried downloading the earlier version 5.61, but I received the 
>> same error.
>>  
>> What seems to be the reason for that, and how can I fix that?
>>  
>> Thanks,
>>  
>> Alon S. Keren
>> PhD Student
>> Leon Deouell's Human Cognitive Neuroscience Laboratory
>> Interdisciplinary Center for Neural Computation
>> The Hebrew University of Jerusalem
>>
>> ------------------------------------------------------------------------
>>
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>>
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>
>




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