[caret-users] Flattening process with new caret version

[Donna Dierker]

Hi Sofia,

When I select Surface: Flatten Full or Partial Hemisphere; set 
Flattening type to Full Hemisphere (Ellipsoid) and Morph Sphere; and 
click on the "Choose Template Borders" on the Border Template Cuts menu, 
I see Human Standard Left and Human Standard Right -- just as before.  
Based on an earlier dataset you uploaded, I think you're working with 
human, rather than monkey data.  The lobar cuts are appropriate for 
people like Joel Price, who are interested in the frontal lobe in 
particular, and don't want a frontal cut in the middle of the region of 
interest.  If in doubt, select the standard cuts.

I am using Caret v5.610, 1/13/2008 (Linux).

Donna

On 01/15/2009 07:40 AM, Sofia Crespi wrote:
> Hi Donna
> I have a problem with the segmentation and flattening processes with 
> the new version (caret v5.6) I have downloaded.
> with the old version (5.5) I segmentated my volume, once the 
> segmentation process finished I corrected manually the topological 
> errors still present and finally I generated a final surface for 
> flattening.
> Then I used to select the Ellipsoid Surface, from the Surface Menu and 
> on the Flatten Full or Partial Hemisphere  Dialog I set the Flattening 
> type to Full Hemisphere (Ellipsoid) and Morph Sphere finally I 
> selected the Human Right (or left!) Standard Cuts as Border Template 
> Cuts.With my new caret version this last step is no more possible.
> I can only choose between :
> 1. choose template Borders.....But I do not know which Template 
> Borders I should select and where to find the template
> 2. Use currently loaded Ellipsoidal Borders, but if I choose this 
> second option caret tells me that Border Files contains no Borders.
> ???
>  
> Can you help me?
> thank you in advance
> sofia
>  
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